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MCAT Organic Chemistry 2
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Subjects
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mcat
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science
Instructions:
Answer 50 questions in 15 minutes.
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Match each statement with the correct term.
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This is a study tool. The 3 wrong answers for each question are randomly chosen from answers to other questions. So, you might find at times the answers obvious, but you will see it re-enforces your understanding as you take the test each time.
1. What stabilizes lipid bilayer?
van der Waal forces of hydrophobic tails
epimers
alpha helix
stereoisomers
2. What configuration do all naturally occuring amino acids have?
quaternary structure
ketose
1. presence of strong acids 2. proteolytic enzymes
L- configuration
3. Nonpolar - hydrophobic amino acids
NH2CONH2
peptide bonds and disulfide bonds
3 things about the cyclic form of a sugar as a hemiacetal
glycine - alanine - valine - methionine - leucine - isoleucine - proline - phenylalanine - tryptophan
4. 4 causes of denaturation of proteins
1. presence of urea 2. extreme pH 3. extreme temperature 4. changes in salinity
CH3COOH
only amino acid that his a secondary amine
the basic precursor of the molecule (L or D glyceraldehyde)
5. Unique feature of cysteine
only achiral amino acid
isoelectric point
amphoteric
has thiol group that allows it the form disulfide bond
6. Right handed helix w/ carboxyl of one amino acid bound to the amine of another amino acid three residues away - proline never resides in this structure b/c it would place a kink in the helix
quaternary structure
Beta pleated sheet
starch
alpha helix
7. Physiological pH
modulates fluidity and seeks to maintain optimal fluidity
have an R group that is polar enough to H bond - but does no acts an acid or a base
7.4
tertiary structure
8. Hydrophobic and hydrophilic interactions btw amino acids more distant from each other on the polypeptide chain
isoelectric point
aldose
tertiary structure
glucose - beta -1 -4- glucose
9. Fatty acid w/ no double bonds and maximum number of hydrogens
glucose - alpha -1 -2- fructose
saturated fatty acid
stereoisomers
cysteine and methionine
10. (+) and (-) describe what?
glycerol
anomers
CH3COOH
optical activity
11. Sulfur containing amino acids
glycine - alanine - valine - methionine - leucine - isoleucine - proline - phenylalanine - tryptophan
only achiral amino acid
tertiary structure
cysteine and methionine
12. Glycosidic linkage of maltose
glutamic acid and aspartic acid
D- amino acid
pI
glucose - alpha -1 -4- glucose
13. PH at which positive and negative charges balance to form a zwitterion
pI
the basic precursor of the molecule (L or D glyceraldehyde)
1. presence of strong acids 2. proteolytic enzymes
only amino acid that his a secondary amine
14. Basic amino acids
only amino acid that his a secondary amine
isoelectric point
histidine - arginine - lysine
triacylglycerol
15. Fxn of cholesterol in the membrane?
absolute configuration
serine - threonine - asparagine - glutamine - cysteine - tyrosine
modulates fluidity and seeks to maintain optimal fluidity
C3H6O3 - with one chiral center
16. Characteristics of polar amino acids
peptide bond
CH3COOH
have an R group that is polar enough to H bond - but does no acts an acid or a base
glucose - beta -1 -4- glucose
17. Hydrolysis
basic amino acid has pKa at 6.5 - so it can either be protonated or deprotonated at physiological pH
addition of water across of a bond
lipases
peptide bond
18. (R) and (S) describe what?
peptide bonds and disulfide bonds
Ka
absolute configuration
long chain of unsubstituted alkanes that end in a carboxylic acid - making them amphipathic
19. Energy storage molecule of carbohydrates for animals
1. presence of urea 2. extreme pH 3. extreme temperature 4. changes in salinity
optical activity
glycogen
Beta pleated sheet
20. Acidic amino acids
1. presence of strong acids 2. proteolytic enzymes
histidine - arginine - lysine
the basic precursor of the molecule (L or D glyceraldehyde)
glutamic acid and aspartic acid
21. 3 physiological roles of lipids
parallel beta sheet
antiparallel beta sheet
Beta pleated sheet
1. form phospholipids of cellular membranes 2. store energy in adipose tissue 3. produce steroid hormones
22. Macromolecule that performs a variety of bodily functions and is composed of up to 20 different amino acids
NH2CONH2
parallel beta sheet
Proteins
isoelectric point
23. Interaction btw polypeptide subunits arranged in polypeptide. can be covalent bonds or intermolecular forces - disulfide bond that does not form btw residues on the same protein affect (blank)
have alkyl or aromatic side chains and tend to associate w/ each other - rather than water
quaternary structure
lipases
have an R group that is polar enough to H bond - but does no acts an acid or a base
24. 3 carbon triol that forms backbone of triacylglycerol
optical activity
C3H6O3 - with one chiral center
NH2CONH2
glycerol
25. Glycosidic linkage of lactose
galactose - beta -1 -4- glucose
aldose
2 things about the cyclic form of a sugar as an acetal
NH2CONH2
26. What kind of lipids compromise the lipid bilayer?
Cause of Amino acid separation in gel electrophoresis
phospholipids
ketose
mutarotation
27. Energy storage molecule of carbohydrates for plants
CH3COOH
starch
saturated fatty acid
aldose
28. Separation is due to charge - with negative charge moving toward positive electrode and positive charge moving toward negative electrode
anomeric carbon
glucose - alpha -1 -4- glucose
antiparallel beta sheet
Cause of Amino acid separation in gel electrophoresis
29. 2 reasons why fats have more efficient energy stores than carbs
long chain of unsubstituted alkanes that end in a carboxylic acid - making them amphipathic
glycerol
triacylglycerol
packing and energy content
30. Storage form of fatty acid that is composed of 3 esterified fatty acid to a glycerol molecule
basic amino acid has pKa at 6.5 - so it can either be protonated or deprotonated at physiological pH
Beta pleated sheet
peptide bond
triacylglycerol
31. Fatty acid w/ one or more double bonds in cis form predominately
furanose
unsaturated fatty acid
disulfide bond
3 things about the cyclic form of a sugar as a hemiacetal
32. Adjacent polypeptide strands running in the same direction in Beta pleated sheet structure
histidine - arginine - lysine
parallel beta sheet
long chain of unsubstituted alkanes that end in a carboxylic acid - making them amphipathic
phospholipids
33. Name for 6 membered ring
isomers
Beta pleated sheet
only amino acid that his a secondary amine
pyranose
34. 2 things that accelerate the rate of hydrolysis for peptide cleavage?
have alkyl or aromatic side chains and tend to associate w/ each other - rather than water
unsaturated fatty acid
1. presence of strong acids 2. proteolytic enzymes
glutamic acid and aspartic acid
35. Name for 5 membered ring
have an R group that is polar enough to H bond - but does no acts an acid or a base
CH3COOH
lactase
furanose
36. Molecules with the same atoms and same bonds - but different bond geometries; can either be enantiomers or diastereomers
have amino group in their side chains
disulfide bond
unsaturated fatty acid
stereoisomers
37. Interconversion btw two anomers
mutarotation
3 things about the cyclic form of a sugar as a hemiacetal
stereoisomers
have amino group in their side chains
38. Generated btw either thiols on different proteins or thiols on the same protein
7.4
isoelectric point
disulfide bond
phospholipids
39. Adjacent polypeptide strands running in opposite directions in Beta pleated sheet structure
stereoisomers
pyranose
CH3COOH
antiparallel beta sheet
40. Acetic acid formula?
glucose - alpha -1 -2- fructose
have acidic carboxylic acid on side chains - w/ pKa around 4
Characteristics of the peptide bond
CH3COOH
41. PH at which the amino acid has a net neutral charge
isoelectric point
quaternary structure
maltase
1. form phospholipids of cellular membranes 2. store energy in adipose tissue 3. produce steroid hormones
42. Sugar with an aldehyde at the first carbon position
L- amino acid
mutarotation
aldose
7.4
43. 1. it requires an enzyme to linearize and mutarotate 2. it is not a reducing sugar and give negative Benedict's test
antiparallel beta sheet
Cause of Amino acid separation in gel electrophoresis
2 things about the cyclic form of a sugar as an acetal
amphipathic
44. Property of fatty acids where one end is hydrophobic and the other is hydrophilic
amphipathic
C3H6O3 - with one chiral center
only achiral amino acid
unsaturated fatty acid
45. Amino group placed on the left of a fischer projection is a?
have acidic carboxylic acid on side chains - w/ pKa around 4
L- amino acid
parallel beta sheet
basic amino acid has pKa at 6.5 - so it can either be protonated or deprotonated at physiological pH
46. Glyceraldehyde
epimers
van der Waal forces of hydrophobic tails
pI
C3H6O3 - with one chiral center
47. Covalent bond formed btw carboxyl group of one atom and the amino group of another amino acid in an addition - elimination mechanism - enzymes are required to carry out rxn
long chain of unsubstituted alkanes that end in a carboxylic acid - making them amphipathic
triacylglycerol
peptide bond
unsaturated fatty acid
48. Structure where H bonds occur btw residues distant from each other - or on a separate chain. backbone is extended rather than coiled
serine - threonine - asparagine - glutamine - cysteine - tyrosine
Beta pleated sheet
anomeric carbon
isomers
49. Epimers of sugars that vary in the configuration of their anomeric carbons
peptide bond
glutamic acid and aspartic acid
anomeric carbon
anomers
50. 1.has partial double bond character due to resonance 2. it cannot rotate 3. amide H is someWhat acidic and can H bond
lactase
isoelectric point
Characteristics of the peptide bond
phospholipids
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