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MCAT Organic Chemistry 2
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Subjects
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mcat
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science
Instructions:
Answer 50 questions in 15 minutes.
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Match each statement with the correct term.
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This is a study tool. The 3 wrong answers for each question are randomly chosen from answers to other questions. So, you might find at times the answers obvious, but you will see it re-enforces your understanding as you take the test each time.
1. What configuration do all naturally occuring amino acids have?
primary structure
amphipathic
Cause of Amino acid separation in gel electrophoresis
L- configuration
2. Interconversion btw two anomers
isomers
epimers
packing and energy content
mutarotation
3. PH at which the amino acid has a net neutral charge
secondary structure
all acidic - basic - and polar amino acids
7.4
isoelectric point
4. Carbon that in linear form has a carbonyl - or in cyclic form has a hemiacetal or an acetal
amphoteric
NH2CONH2
anomeric carbon
packing and energy content
5. D and L describe what?
the basic precursor of the molecule (L or D glyceraldehyde)
Cause of Amino acid separation in gel electrophoresis
maltase
L- configuration
6. Glycosidic linkage of lactose
saturated fatty acid
galactose - beta -1 -4- glucose
NH2CONH2
glucose - beta -1 -4- glucose
7. Hydrolysis
1. presence of urea 2. extreme pH 3. extreme temperature 4. changes in salinity
optical activity
addition of water across of a bond
tertiary structure
8. 4 causes of denaturation of proteins
ketose
saturated fatty acid
1. presence of urea 2. extreme pH 3. extreme temperature 4. changes in salinity
L- configuration
9. Glycosidic linkage of sucrose
Beta pleated sheet
glucose - alpha -1 -2- fructose
serine - threonine - asparagine - glutamine - cysteine - tyrosine
glycine - alanine - valine - methionine - leucine - isoleucine - proline - phenylalanine - tryptophan
10. Molecule can act as a base and as an acid
amphoteric
histidine - arginine - lysine
D- glyceraldehyde
pI
11. Initial folding of proteins into shapes stabilized by H bonds btw amino and carboxyl groups of backbone
glucose - alpha -1 -2- fructose
secondary structure
1. presence of urea 2. extreme pH 3. extreme temperature 4. changes in salinity
alpha helix
12. What kind of lipids compromise the lipid bilayer?
optical activity
2 things about the cyclic form of a sugar as an acetal
glucose - alpha -1 -4- glucose
phospholipids
13. Characteristics of polar amino acids
triacylglycerol
isomers
have an R group that is polar enough to H bond - but does no acts an acid or a base
basic amino acid has pKa at 6.5 - so it can either be protonated or deprotonated at physiological pH
14. 3 physiological roles of lipids
isomers
1. form phospholipids of cellular membranes 2. store energy in adipose tissue 3. produce steroid hormones
histidine - arginine - lysine
packing and energy content
15. Hydrophobic and hydrophilic interactions btw amino acids more distant from each other on the polypeptide chain
the basic precursor of the molecule (L or D glyceraldehyde)
all acidic - basic - and polar amino acids
amphipathic
tertiary structure
16. Characteristics of acidic amino acids
have acidic carboxylic acid on side chains - w/ pKa around 4
disulfide bond
unsaturated fatty acid
stereoisomers
17. Diastereomers that vary in the configuration of 1 chiral center
have an R group that is polar enough to H bond - but does no acts an acid or a base
primary structure
pyranose
epimers
18. The amino acid sequence of a protein that is determined by peptide bond
anomeric carbon
primary structure
alpha helix
optical activity
19. Amino group placed on the left of a fischer projection is a?
quaternary structure
basic amino acid has pKa at 6.5 - so it can either be protonated or deprotonated at physiological pH
L- amino acid
2 things about the cyclic form of a sugar as an acetal
20. Hydrophilic amino acids
all acidic - basic - and polar amino acids
serine - threonine - asparagine - glutamine - cysteine - tyrosine
epimers
glucose - beta -1 -4- glucose
21. Acetic acid formula?
CH3COOH
all acidic - basic - and polar amino acids
packing and energy content
histidine - arginine - lysine
22. Rule for all amino acids that are nonbasic and nonacidic pertaining to pI value?
glucose - alpha -1 -2- fructose
modulates fluidity and seeks to maintain optimal fluidity
absolute configuration
will have pI of 6
23. What describes the affinity of functional groups for a proton?
isoelectric point
Characteristics of the peptide bond
long chain of unsubstituted alkanes that end in a carboxylic acid - making them amphipathic
Ka
24. 3 carbon triol that forms backbone of triacylglycerol
ketose
glycerol
L- amino acid
primary structure
25. Adjacent polypeptide strands running in the same direction in Beta pleated sheet structure
basic amino acid has pKa at 6.5 - so it can either be protonated or deprotonated at physiological pH
1. presence of urea 2. extreme pH 3. extreme temperature 4. changes in salinity
parallel beta sheet
phospholipids
26. Enzymes that hydrolyze fats
will have pI of 6
lipases
D- amino acid
peptide bond
27. (R) and (S) describe what?
absolute configuration
epimers
have acidic carboxylic acid on side chains - w/ pKa around 4
1. presence of strong acids 2. proteolytic enzymes
28. Name for 6 membered ring
has thiol group that allows it the form disulfide bond
mutarotation
pyranose
the basic precursor of the molecule (L or D glyceraldehyde)
29. Epimers of sugars that vary in the configuration of their anomeric carbons
pI
pyranose
anomers
saturated fatty acid
30. Adjacent polypeptide strands running in opposite directions in Beta pleated sheet structure
Cause of Amino acid separation in gel electrophoresis
tertiary structure
anomers
antiparallel beta sheet
31. Naturally occurring carbohydrates are formed from what?
CH3COOH
D- glyceraldehyde
van der Waal forces of hydrophobic tails
the basic precursor of the molecule (L or D glyceraldehyde)
32. Molecules with the same atoms - but different bonds
2 things about the cyclic form of a sugar as an acetal
van der Waal forces of hydrophobic tails
pI
isomers
33. 2 covalent bonds formed in proteins
pyranose
isomers
peptide bonds and disulfide bonds
L- configuration
34. Energy storage molecule of carbohydrates for plants
optical activity
glucose - alpha -1 -4- glucose
starch
L- configuration
35. 1.has partial double bond character due to resonance 2. it cannot rotate 3. amide H is someWhat acidic and can H bond
basic amino acid has pKa at 6.5 - so it can either be protonated or deprotonated at physiological pH
isomers
1. presence of urea 2. extreme pH 3. extreme temperature 4. changes in salinity
Characteristics of the peptide bond
36. Basic amino acids
saturated fatty acid
secondary structure
C3H6O3 - with one chiral center
histidine - arginine - lysine
37. Nonpolar - hydrophobic amino acids
CH3COOH
glycine - alanine - valine - methionine - leucine - isoleucine - proline - phenylalanine - tryptophan
mutarotation
triacylglycerol
38. Energy storage molecule of carbohydrates for animals
1. form phospholipids of cellular membranes 2. store energy in adipose tissue 3. produce steroid hormones
packing and energy content
glycogen
serine - threonine - asparagine - glutamine - cysteine - tyrosine
39. Property of fatty acids where one end is hydrophobic and the other is hydrophilic
amphipathic
triacylglycerol
anomers
all acidic - basic - and polar amino acids
40. Glyceraldehyde
C3H6O3 - with one chiral center
modulates fluidity and seeks to maintain optimal fluidity
pyranose
peptide bonds and disulfide bonds
41. Characteristics of hydrophobic amino acids
unsaturated fatty acid
have alkyl or aromatic side chains and tend to associate w/ each other - rather than water
isomers
have amino group in their side chains
42. Storage form of fatty acid that is composed of 3 esterified fatty acid to a glycerol molecule
epimers
triacylglycerol
long chain of unsubstituted alkanes that end in a carboxylic acid - making them amphipathic
have amino group in their side chains
43. PH at which positive and negative charges balance to form a zwitterion
basic amino acid has pKa at 6.5 - so it can either be protonated or deprotonated at physiological pH
pI
ketose
Characteristics of the peptide bond
44. Unique feature of glycine
only achiral amino acid
have an R group that is polar enough to H bond - but does no acts an acid or a base
peptide bond
the basic precursor of the molecule (L or D glyceraldehyde)
45. Interaction btw polypeptide subunits arranged in polypeptide. can be covalent bonds or intermolecular forces - disulfide bond that does not form btw residues on the same protein affect (blank)
disulfide bond
starch
quaternary structure
galactose - beta -1 -4- glucose
46. (+) and (-) describe what?
parallel beta sheet
optical activity
packing and energy content
glucose - alpha -1 -2- fructose
47. Unique feature of cysteine
lactase
has thiol group that allows it the form disulfide bond
galactose - beta -1 -4- glucose
isoelectric point
48. What stabilizes lipid bilayer?
maltase
lactase
van der Waal forces of hydrophobic tails
histidine - arginine - lysine
49. Fatty acid w/ one or more double bonds in cis form predominately
aldose
unsaturated fatty acid
have alkyl or aromatic side chains and tend to associate w/ each other - rather than water
Ka
50. Glycosidic linkage of cellulose
NH2CONH2
2 things about the cyclic form of a sugar as an acetal
glucose - beta -1 -4- glucose
only achiral amino acid
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